Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015940703.1_cds_XP_016484857.1_75830
CDS Infomation

[gene=LOC107805339] [db_xref=GeneID:107805339] [protein=T-complex protein 1 subunit zeta 1] [protein_id=XP_016484857.1] [location=join(8363..8496,8581..8644,10285..10420,10919..11070,11169..11216,11541..11633,12444..12550,12636..12750,12837..12923,13970..14174,14303..14397,15164..15232,15337..15444,15535..15653,15890..15965)] [gbkey=CDS]
Sequence

ATGTCTGTAAAGGTACTGAATCCAAATGCAGAGGTTCTCAACAAATCTGCGGCGCTTCAC
ATGAACATCAACGCCGCCAAGGGTTTACAGGATGTTCTCAAAACCAATCTCGGCCCTAAA
GGCACCATCAAGATGCTTGTTGGCGGTGCCGGTGATATTAAGCTTACTAAGGATGGTAAC
ACATTGTTGAAAGAGATGCAAATTCAGAACCCAACTGCAATAATGATTGCTAGGACTGCT
GTAGCTCAAGATGATACTAGTGGGGATGGTACTACATCTACTGTGCTTTTCATTGGGGAG
CTCATGAAACAATCTGAACGATGCATAGATGAAGGGATGCATCCTCGTGTGCTAGTTGAT
GGTTTTGAAATTGCAAAAAGAGCAACTCTACAATTTCTTGAAAAATTTAAGACTCCTGTA
GTGATGGGTAATGAGCCAGATAAAGAGATACTGAAGATGGTTGCAAGAACGACATTGAGA
ACAAAGTTGTATGAAGCACTGGCTGATCAGCTAACTGACATTGTTGCTAATGCTGTGCTC
TGCATTCGCAAGCCTGAAGAAGCTATTGATCTTTTTATGGTTGAGATAATGCACATGCGT
CACAAGTTTGATGTGGACACTCGTTTGGTTGAGGGTCTTGTACTTGATCATGGTTCAAGA
CATCCAGACATGAAAAGGCGGGCAGAGAACTGTTACATTATGACTTGTAATGTCTCTCTT
GAATACGAGAAGAGTGAAGTAAATGCAGGATTTTTCTATTCAAATGCAGAGCAGAGAGAG
GCAATGGTTGCTGCAGAAAGGCGTTCTGTTGATGAGAGGGTGCAAAAGATAATTGACCTA
AAGAACAAGGTCTGCGCTGGAAATGACAACAATTTTGTTATCATCAATCAGAAGGGGATT
GATCCTCCATCTCTTGACATTCTTGCTCGGGCAGGAATAATCGCACTTCGAAGGGCAAAG
AGGAGAAATATGGAACGTTTGGTTTTGGCTTGTGGCGGGGAGGCAGTTAACTCTGTTGAT
GACCTAACTCCTGATTGCCTTGGCTGGGCTGGGCTGGTCTATGAGCATGTTCTTGGTGAA
GAGAAGTATACCTTTGTAGAAAATGTCAAAAATCCTCATTCCTGTACTATTCTTATCAAA
GGGCCTAATGATCACACAATAGCTCAAATCAAGGATGCAGTCCGTGATGGACTAAGGGCA
GTCAAAAATACCATTGAAGATGAAGCAGTTGTACTCGGTGCCGGGACCTTCGAAGTTGCA
GCTCGTCAACACCTGATTAACGAAGTGAAAAAGACTGTTAAAGGGCGTGCTCAACTTGGA
GTGGAAGCTTTTGCTAATGCTCTCCTTGTGATACCAAAGACACTTGCTGAGAACTCTGGC
CTTGATACACAAGATGTGATCATAGCTCTAACGGGAGAGCATGACAAAGGAAATGTTGTC
GGACTAAATCATCACACTGGAGAACCTATAGATCCACAAATGGAGGGTATATTTGACAAC
TATTCCGTGAAGCGTCAGATTGTTAATTCTGGGCCTGTTATAGCATCTCAGCTGTTACTT
GTTGATGAAGTAATTCGTGCTGGACGAAACATGAGGAAACCAAATTAG

Peptide Sequence

PEP ID

XP_016484857.1
PEP Infomation

PREDICTED: T-complex protein 1 subunit zeta 1 [Nicotiana tabacum]
Sequence

MSVKVLNPNAEVLNKSAALHMNINAAKGLQDVLKTNLGPKGTIKMLVGGAGDIKLTKDGN
TLLKEMQIQNPTAIMIARTAVAQDDTSGDGTTSTVLFIGELMKQSERCIDEGMHPRVLVD
GFEIAKRATLQFLEKFKTPVVMGNEPDKEILKMVARTTLRTKLYEALADQLTDIVANAVL
CIRKPEEAIDLFMVEIMHMRHKFDVDTRLVEGLVLDHGSRHPDMKRRAENCYIMTCNVSL
EYEKSEVNAGFFYSNAEQREAMVAAERRSVDERVQKIIDLKNKVCAGNDNNFVIINQKGI
DPPSLDILARAGIIALRRAKRRNMERLVLACGGEAVNSVDDLTPDCLGWAGLVYEHVLGE
EKYTFVENVKNPHSCTILIKGPNDHTIAQIKDAVRDGLRAVKNTIEDEAVVLGAGTFEVA
ARQHLINEVKKTVKGRAQLGVEAFANALLVIPKTLAENSGLDTQDVIIALTGEHDKGNVV
GLNHHTGEPIDPQMEGIFDNYSVKRQIVNSGPVIASQLLLVDEVIRAGRNMRKPN

Transcript Sequence

Gene sequence data has not been registered.